304 items found

Tags: Sampling and laboratory testing

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  • GlossaryTerm

    Reference genome

    A curated consensus sequence for all of the DNA in the genome (all of the chromosomes) of a species of organism. Because the reference genome is created as the synthesis of a...
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  • GlossaryTerm

    Clone (Cell biology)

    A clone is a group of identical cells (e.g. bacteria) that share a common ancestry, meaning they are derived from the same cell.
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  • GlossaryTerm

    sampling strategy

  • GlossaryTerm

    ready-to-eat food

  • GlossaryTerm

    concentration of pathogens

    Number of target organisms present in a defined volume/weight/area of a sample
  • GlossaryTerm

    census (sampling)

    When the totality of a population or sub-population, on which the data are reported, is included.
  • GlossaryTerm

    cluster amplification

    how sequencing works in most NGS methods, a single library fragment is amplified and copied in a physically isolated location.
  • GlossaryTerm

    gold standard

    An analytical method, agreed upon as the best method for a certain analyte in a certain matrix, to which alternative methods shoul be compared. The standard culture procedures...
  • GlossaryTerm

    hermetically sealed container

    a container that is designed and intended to be secure against the entry of hazards
  • GlossaryTerm

    isolate

    A pure strain of bacteria which has been seperated from a mixed bacterial culture
  • GlossaryTerm

    epidemiological cut-off values

    are measures of a drugs minimum inhibitory concentration distribution that separate bacterial populations into those representative of a wild type population, and those with...
  • GlossaryTerm

    clinical breakpoint

    Term not used in this sector
  • GlossaryTerm

    contamination

    the presence or introduction of a hazard
  • GlossaryTerm

    core genome mlst (cgmlst)

    consist of a fixed set of conserved species specific genes
  • GlossaryTerm

    base calling

    Base calling is the process of algorithmically deciding the incorporated nucleotide from the signal intensities that are detected during sequencing process.
  • GlossaryTerm

    census (sampling)

    When the totality of a population or sub-population, on which the data are reported, is included.
  • GlossaryTerm

    contamination

    the presence or introduction of a hazard
  • GlossaryTerm

    core genome mlst (cgmlst)

    consist of a fixed set of conserved species specific genes. Better definition: Strain differentiation by determining the number different alleles in a predefined set of loci...
  • GlossaryTerm

    confirmed case definition

    A set of uniformly applied criteria for determining whether an individual should be identified as having a particular disease, injury, or other health condition. In...
  • GlossaryTerm

    gold standard

    Perfect reference standard, i.e. sensitivity and specificity 100%