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Reference genome
A curated consensus sequence for all of the DNA in the genome (all of the chromosomes) of a species of organism. Because the reference genome is created as the synthesis of a...-
Shared Definition
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Shared Definition
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Clone (Cell biology)
A clone is a group of identical cells (e.g. bacteria) that share a common ancestry, meaning they are derived from the same cell.-
Shared Definition
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Shared Definition
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concentration of pathogens
Number of target organisms present in a defined volume/weight/area of a sample -
census (sampling)
When the totality of a population or sub-population, on which the data are reported, is included. -
cluster amplification
how sequencing works in most NGS methods, a single library fragment is amplified and copied in a physically isolated location. -
gold standard
An analytical method, agreed upon as the best method for a certain analyte in a certain matrix, to which alternative methods shoul be compared. The standard culture procedures... -
hermetically sealed container
a container that is designed and intended to be secure against the entry of hazards -
epidemiological cut-off values
are measures of a drugs minimum inhibitory concentration distribution that separate bacterial populations into those representative of a wild type population, and those with... -
base calling
Base calling is the process of algorithmically deciding the incorporated nucleotide from the signal intensities that are detected during sequencing process. -
census (sampling)
When the totality of a population or sub-population, on which the data are reported, is included. -
core genome mlst (cgmlst)
consist of a fixed set of conserved species specific genes. Better definition: Strain differentiation by determining the number different alleles in a predefined set of loci... -
confirmed case definition
A set of uniformly applied criteria for determining whether an individual should be identified as having a particular disease, injury, or other health condition. In...