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Data Standardisation
The process of reaching agreement on common data definitions, formats, representation and structures of all data layers and elements.-
Shared Definition
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Shared Definition
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Health Surveillance Ontology (HSO)
A collection of concepts and relationships needed to model all the data and information collected in the process of surveillance, including surveillance inputs, methods, and...-
Shared Definition
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Shared Definition
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Pipeline
Bioinformatic analyses invariably involve shepherding files through a series of transformations, called a pipeline or a workflow.-
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Shared Definition
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Analytical Epidemiology
The aspect of epidemiology concerned with why and how a health problem occurs. Analytic epidemiology uses comparison groups to provide baseline or expected values so that...-
Shared Definition
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Case-based Dataset
Dataset format includes information on individual records related to a disease/health event-
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Shared Definition
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Complete Linkage Clustering
One of several methods of agglomerative hierarchical clustering. At the beginning of the process, each element is in a cluster of its own. The clusters are then sequentially...-
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Shared Definition
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Reference genome
A curated consensus sequence for all of the DNA in the genome (all of the chromosomes) of a species of organism. Because the reference genome is created as the synthesis of a...-
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Shared Definition
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(surveillance) data harmonization
In the context of epidemiology: Making data from different sources comparable. The processes involved in producing inferentially equivalent data. -
One Health Surveillance (OHS) ontology
A collection of concepts and relationships needed to model all the data and information collected in the process of surveillance, including surveillance inputs, methods, and... -
(surveillance) data harmonization
__In the context of epidemiology: Making data from different sources comparable. The processes involved in producing inferentially equivalent data.test -
analytical epidemiology
The aspect of epidemiology concerned with why and how a health problem occurs. Analytic epidemiology uses comparison groups to provide baseline or expected values so that... -
(surveillance) data harmonization
In the context of epidemiology: Making data from different sources comparable. The processes involved in producing inferentially equivalent data. Related Terms:data integration -
complete linkage clustering
one of several methods of agglomerative hierarchical clustering. At the beginning of the process, each element is in a cluster of its own. The clusters are then sequentially... -
data standard
Data standards are documented agreements on representation, format, definition, structuring, tagging, transmission, manipulation, use, and management of data. -
decision (tree) algorithm
Criteria used to categorise output for decision making at any stage of the surveillance process -
data validation
Provides well-defined guarantees for fitness, accuracy, and consistency for any of various kinds of user input into an application or automated system. Data validation checks... -
analytical methodologies
Different scientifically valid methodologies may be used for the analysis of non-random surveillance data. Where no data are available, estimates based on expert opinions,... -
data anonymisation/ pseudomysation
The processing of personal data in such a way that the data can no longer be attributed to a specific data subject without the use of additional information, as long as such... -
contigs
A contiguous stretch of DNA sequence that is the result of assembly of multiple overlapping sequence reads into a single consensus sequence. A contig requires a complete tiling... -
gold standard
A method, procedure, or measurement that is widely accepted as being the best available. Often used to compare with new methods.